Draw
20241/32-finals
| 1 | LDU Quito | Bye | |
| 2 | La Union | Bonita Banana | 1 : 3 |
| 3 | Dep. Cuenca | Bye | |
| 4 | Ecuagenera | Manta | 0 : 1 |
| 5 | Orense | Bye | |
| 6 | Dep. Santo Domingo | Rio Babahoyo | 1 : 0 |
| 7 | EL Nacional | Bye | |
| 8 | Banos | Vargas Torres | 2 : 1 |
| 9 | Barcelona SC | Bye | |
| 10 | Grupo 7 | Ind. Juniors | 0 : 2 |
| 11 | Mushuc Runa | Bye | |
| 12 | Rio Aguarico | Leones del Norte | 0 : 2 |
| 13 | Aucas | Bye | |
| 14 | La Castellana | Atl. Quininde | 2 : 1 |
| 15 | Libertad | Bye | |
| 16 | Vicentino Dragons | Deportivo Coca | 1 : 0 |
| 17 | Macara | Bye | |
| 18 | Mineros | Cuniburo | 3 : 4 |
| 19 | Ind. del Valle | Bye | |
| 20 | Olmedo | Gualaceo | 1 : 0 |
| 21 | Cumbaya | Bye | |
| 22 | Naranja Mekanica | Guayaquil City | 0 : 1 |
| 23 | Delfin | Bye | |
| 24 | Liga Cuenca | Junior FC | 4 : 0 |
| 25 | Emelec | Bye | |
| 26 | Tumbaco | Chacaritas | 1 : 0 |
| 27 | Tecnico U. | Bye | |
| 28 | La Cantera | Nueve de Octubre | 2 : 1 |
| 29 | Imbabura | Bye | |
| 30 | Santa Elena Sumpa | San Antonio | 2 : 0 |
| 31 | U. Catolica | Bye | |
| 32 | Dunamis | La Paz | 0 : 2 |
1/16-finals
| 1 | LDU Quito | Bonita Banana | 1 : 0 |
| 2 | Dep. Cuenca | Manta | 3 : 1 |
| 3 | Orense | Dep. Santo Domingo | 1 : 3 |
| 4 | EL Nacional | Banos | 2 : 1 |
| 5 | Barcelona SC | Ind. Juniors | 0 : 2 |
| 6 | Mushuc Runa | Leones del Norte | 1 : 0 |
| 7 | Aucas | La Castellana | 5 : 1 |
| 8 | Libertad | Vicentino Dragons | 2 : 0 |
| 9 | Macara | Cuniburo | 1 : 3 |
| 10 | Ind. del Valle | Olmedo | 1 : 0 |
| 11 | Cumbaya | Guayaquil City | 0 : 3 |
| 12 | Delfin | Liga Cuenca | 2 : 1 |
| 13 | Emelec | Tumbaco | 2 : 1 |
| 14 | Tecnico U. | La Cantera | 3 : 0 |
| 15 | Imbabura | Santa Elena Sumpa | 0 : 1 |
| 16 | U. Catolica | La Paz | 1 : 0 |
1/8-finals
| 1 | LDU Quito | Dep. Cuenca | 3 : 0 |
| 2 | Dep. Santo Domingo | EL Nacional | 2 : 3 |
| 3 | Ind. Juniors | Mushuc Runa | 0 : 1 |
| 4 | Aucas | Libertad | 0 : 1 |
| 5 | Cuniburo | Ind. del Valle | 1 : 2 |
| 6 | Guayaquil City | Delfin | 3 : 1 |
| 7 | Emelec | Tecnico U. | 0 : 1 |
| 8 | Santa Elena Sumpa | U. Catolica | 1 : 4 |
Quarter-finals
| 1 | LDU Quito | EL Nacional | |
| 2 | Mushuc Runa | Libertad | |
| 3 | Ind. del Valle | Guayaquil City | |
| 4 | Tecnico U. | U. Catolica |
Semi-finals
| 1 | TBD #1 | TBD #2 | |
| 2 | TBD #3 | TBD #4 |
Final
| 1 | TBD #1 | TBD #2 |
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