EN
2016 Final Stage
Quarter-finals
| 1 | Perth SC | Devonport | 6 : 1 |
| 2 | Bentleigh Greens | Edgeworth E. | 1 : 3 |
| 3 | Sydney Utd | Adelaide City | 5 : 4 |
| 4 | Canberra Olympic | Brisbane Strikers | 2 : 3 |
Semi-finals
| 1 | Perth SC | Edgeworth E. | 0 : 1 |
| 2 | Sydney Utd | Brisbane Strikers | 2 : 1 |
Final
| 1 | Edgeworth E. | Sydney Utd | 1 : 4 |
2016 Main
| Pl | W | D | L | Diff | Pts | |||
| 1 | Sydney Utd | 22 | 17 | 3 | 2 | 58:21 | 37 | 54 |
| 2 | Blacktown City | 22 | 14 | 3 | 5 | 47:26 | 21 | 45 |
| 3 | Manly Utd | 22 | 12 | 7 | 3 | 58:26 | 29 | 43 |
| 4 | Rockdale Ilinden | 22 | 11 | 5 | 6 | 41:32 | 9 | 38 |
| 5 | Bonnyrigg White Eagles | 22 | 9 | 5 | 8 | 43:38 | 5 | 32 |
| 6 | Sydney Olympic | 22 | 7 | 6 | 9 | 26:30 | -7 | 27 |
| 7 | Sutherland Sharks | 22 | 8 | 3 | 11 | 31:40 | -9 | 27 |
| 8 | APIA Leichhardt | 22 | 7 | 5 | 10 | 39:41 | -2 | 26 |
| 9 | Hakoah Sydney | 22 | 7 | 2 | 13 | 40:54 | -14 | 23 |
| 10 | Parramatta Eagles | 22 | 7 | 2 | 13 | 28:44 | -22 | 23 |
| 11 | Wollongong Wolves | 22 | 5 | 4 | 13 | 23:37 | -17 | 19 |
| 12 | Blacktown Spartans | 22 | 4 | 3 | 15 | 22:52 | -30 | 15 |
Promotion ~ National Premier Leagues Play Offs
Promotion ~ NPL NSW (Play Offs: )
Relegation
2016 Play Offs
1/8-finals
| 1 | Sydney Utd | Bye | |
| 2 | Blacktown City | Manly Utd | 4 : 1 |
| 8 | Rockdale Ilinden | Bonnyrigg White Eagles | 2 : 4 |
Quarter-finals
| 1 | Sydney Utd | Blacktown City | 2 : 3 |
| 4 | Manly Utd | Bonnyrigg White Eagles | 0 : 5 |
Semi-finals
| 1 | Blacktown City | Bye | |
| 2 | Sydney Utd | Bonnyrigg White Eagles | 3 : 2 |
Final
| 1 | Blacktown City | Sydney Utd | 3 : 0 |
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